J Biomed Inform - Validating the semantics of a medical iconic language using ontological reasoning.

Tópicos

{ concept(1167) ontolog(924) domain(897) }
{ design(1359) user(1324) use(1319) }
{ system(1050) medic(1026) inform(1018) }
{ data(2317) use(1299) case(1017) }
{ cancer(2502) breast(956) screen(824) }
{ assess(1506) score(1403) qualiti(1306) }
{ learn(2355) train(1041) set(1003) }
{ featur(1941) imag(1645) propos(1176) }
{ risk(3053) factor(974) diseas(938) }
{ perform(999) metric(946) measur(919) }
{ clinic(1479) use(1117) guidelin(835) }
{ analysi(2126) use(1163) compon(1037) }
{ decis(3086) make(1611) patient(1517) }
{ imag(1947) propos(1133) code(1026) }
{ sequenc(1873) structur(1644) protein(1328) }
{ treatment(1704) effect(941) patient(846) }
{ surgeri(1148) surgic(1085) robot(1054) }
{ error(1145) method(1030) estim(1020) }
{ extract(1171) text(1153) clinic(932) }
{ method(1557) propos(1049) approach(1037) }
{ general(901) number(790) one(736) }
{ method(984) reconstruct(947) comput(926) }
{ search(2224) databas(1162) retriev(909) }
{ case(1353) use(1143) diagnosi(1136) }
{ howev(809) still(633) remain(590) }
{ import(1318) role(1303) understand(862) }
{ perform(1367) use(1326) method(1137) }
{ group(2977) signific(1463) compar(1072) }
{ data(3008) multipl(1320) sourc(1022) }
{ intervent(3218) particip(2042) group(1664) }
{ can(981) present(881) function(850) }
{ drug(1928) target(777) effect(648) }
{ result(1111) use(1088) new(759) }
{ process(1125) use(805) approach(778) }
{ detect(2391) sensit(1101) algorithm(908) }
{ model(3404) distribut(989) bayesian(671) }
{ can(774) often(719) complex(702) }
{ data(1737) use(1416) pattern(1282) }
{ inform(2794) health(2639) internet(1427) }
{ system(1976) rule(880) can(841) }
{ measur(2081) correl(1212) valu(896) }
{ imag(1057) registr(996) error(939) }
{ bind(1733) structur(1185) ligand(1036) }
{ method(1219) similar(1157) match(930) }
{ featur(3375) classif(2383) classifi(1994) }
{ imag(2830) propos(1344) filter(1198) }
{ network(2748) neural(1063) input(814) }
{ imag(2675) segment(2577) method(1081) }
{ patient(2315) diseas(1263) diabet(1191) }
{ take(945) account(800) differ(722) }
{ studi(2440) review(1878) systemat(933) }
{ motion(1329) object(1292) video(1091) }
{ framework(1458) process(801) describ(734) }
{ problem(2511) optim(1539) algorithm(950) }
{ chang(1828) time(1643) increas(1301) }
{ algorithm(1844) comput(1787) effici(935) }
{ data(1714) softwar(1251) tool(1186) }
{ control(1307) perform(991) simul(935) }
{ model(2220) cell(1177) simul(1124) }
{ care(1570) inform(1187) nurs(1089) }
{ data(3963) clinic(1234) research(1004) }
{ studi(1410) differ(1259) use(1210) }
{ research(1085) discuss(1038) issu(1018) }
{ model(2341) predict(2261) use(1141) }
{ visual(1396) interact(850) tool(830) }
{ compound(1573) activ(1297) structur(1058) }
{ studi(1119) effect(1106) posit(819) }
{ blood(1257) pressur(1144) flow(957) }
{ spatial(1525) area(1432) region(1030) }
{ record(1888) medic(1808) patient(1693) }
{ health(3367) inform(1360) care(1135) }
{ model(3480) simul(1196) paramet(876) }
{ monitor(1329) mobil(1314) devic(1160) }
{ ehr(2073) health(1662) electron(1139) }
{ state(1844) use(1261) util(961) }
{ research(1218) medic(880) student(794) }
{ patient(2837) hospit(1953) medic(668) }
{ model(2656) set(1616) predict(1553) }
{ age(1611) year(1155) adult(843) }
{ medic(1828) order(1363) alert(1069) }
{ signal(2180) analysi(812) frequenc(800) }
{ cost(1906) reduc(1198) effect(832) }
{ sampl(1606) size(1419) use(1276) }
{ gene(2352) biolog(1181) express(1162) }
{ first(2504) two(1366) second(1323) }
{ activ(1138) subject(705) human(624) }
{ time(1939) patient(1703) rate(768) }
{ patient(1821) servic(1111) care(1106) }
{ use(2086) technolog(871) perceiv(783) }
{ health(1844) social(1437) communiti(874) }
{ structur(1116) can(940) graph(676) }
{ high(1669) rate(1365) level(1280) }
{ use(976) code(926) identifi(902) }
{ use(1733) differ(960) four(931) }
{ implement(1333) system(1263) develop(1122) }
{ survey(1388) particip(1329) question(1065) }
{ estim(2440) model(1874) function(577) }
{ activ(1452) weight(1219) physic(1104) }
{ method(1969) cluster(1462) data(1082) }
{ method(2212) result(1239) propos(1039) }

Resumo

To help clinicians read medical texts such as clinical practice guidelines or drug monographs, we proposed an iconic language called VCM. This language can use icons to represent the main medical concepts, including diseases, symptoms, treatments and follow-up procedures, by combining various pictograms, shapes and colors. However, the semantics of this language have not been formalized, and users may create inconsistent icons, e.g. by combining the "tumor" shape and the "sleeping" pictograms into a "tumor of sleeping" icon. This work aims to represent the VCM language using DLs and OWL for evaluating its semantics by reasoners, and in particular for determining inconsistent icons. We designed an ontology for formalized the semantics of VCM icons using the Prot?g? editor and scripts for translating the VCM lexicon in OWL. We evaluated the ability of the ontology to determine icon consistency for a set of 100 random icons. The evaluation showed good results for determining icon consistency, with a high sensitivity. The ontology may also be useful for the design of mapping between VCM and other medical terminologies, for generating textual labels for icons, and for developing user interfaces for creating VCM icons.

Resumo Limpo

help clinician read medic text clinic practic guidelin drug monograph propos icon languag call vcm languag can use icon repres main medic concept includ diseas symptom treatment followup procedur combin various pictogram shape color howev semant languag formal user may creat inconsist icon eg combin tumor shape sleep pictogram tumor sleep icon work aim repres vcm languag use dls owl evalu semant reason particular determin inconsist icon design ontolog formal semant vcm icon use protg editor script translat vcm lexicon owl evalu abil ontolog determin icon consist set random icon evalu show good result determin icon consist high sensit ontolog may also use design map vcm medic terminolog generat textual label icon develop user interfac creat vcm icon

Resumos Similares

J Am Med Inform Assoc - A semantic-web oriented representation of the clinical element model for secondary use of electronic health records data. ( 0,835110353549005 )
J Biomed Inform - Integrating reasoning and clinical archetypes using OWL ontologies and SWRL rules. ( 0,831167933932589 )
AMIA Annu Symp Proc - Auditing SNOMED Integration into the UMLS for Duplicate Concepts. ( 0,830640356413869 )
J Biomed Inform - A federated semantic metadata registry framework for enabling interoperability across clinical research and care domains. ( 0,830124932507983 )
J Am Med Inform Assoc - Life sciences domain analysis model. ( 0,82834808323068 )
Artif Intell Med - The Foundational Model of Anatomy in OWL 2 and its use. ( 0,822940457757301 )
J Biomed Inform - A query integrator and manager for the query web. ( 0,814278885653206 )
AMIA Annu Symp Proc - Fostering Multilinguality in the UMLS: A Computational Approach to Terminology Expansion for Multiple Languages. ( 0,813259353428853 )
Int J Med Inform - Semantic similarity-based alignment between clinical archetypes and SNOMED CT: an application to observations. ( 0,809618759109793 )
Methods Inf Med - Construction of an interface terminology on SNOMED CT. Generic approach and its application in intensive care. ( 0,809327724235742 )
J Am Med Inform Assoc - Scalable quality assurance for large SNOMED CT hierarchies using subject-based subtaxonomies. ( 0,808615505497642 )
J Biomed Inform - BOAT: automatic alignment of biomedical ontologies using term informativeness and candidate selection. ( 0,807901885250917 )
Appl Clin Inform - Ontology content patterns as bridge for the semantic representation of clinical information. ( 0,807641494859089 )
AMIA Annu Symp Proc - Deriving an abstraction network to support quality assurance in OCRe. ( 0,80299770582213 )
Int J Med Inform - A modified Delphi translation strategy and challenges of International Classification for Nursing Practice (ICNP?). ( 0,798649362266225 )
J Am Med Inform Assoc - Approaching semantic interoperability in Health Level Seven. ( 0,794481855526511 )
Methods Inf Med - An evolutionary approach to realism-based adverse event representations. ( 0,793598267291983 )
AMIA Annu Symp Proc - Modeling and executing electronic health records driven phenotyping algorithms using the NQF Quality Data Model and JBoss? Drools Engine. ( 0,791245841447808 )
BMC Med Inform Decis Mak - Determining correspondences between high-frequency MedDRA concepts and SNOMED: a case study. ( 0,790718858766498 )
J Biomed Inform - Using LOINC to link 10 terminology standards to one unified standard in a specialized domain. ( 0,789590106831438 )
BMC Med Inform Decis Mak - Retrospective checking of compliance with practice guidelines for acute stroke care: a novel experiment using openEHR's Guideline Definition Language. ( 0,788807167002716 )
Methods Inf Med - An eligibility criteria query language for heterogeneous data warehouses. ( 0,786359608968774 )
J Biomed Inform - Enabling international adoption of LOINC through translation. ( 0,785818603096073 )
IEEE Trans Image Process - Structure-preserving sparse decomposition for facial expression analysis. ( 0,785074440168115 )
BMC Med Inform Decis Mak - Querying phenotype-genotype relationships on patient datasets using semantic web technology: the example of Cerebrotendinous xanthomatosis. ( 0,780977222352073 )
AMIA Annu Symp Proc - Standardized mapping of nursing assessments across 59 U.S. military treatment facilities. ( 0,780611249769609 )
AMIA Annu Symp Proc - Evaluation of RxNorm for Representing Ambulatory Prescriptions. ( 0,778344709599502 )
IEEE J Biomed Health Inform - Exploiting Semantic Web Technologies to Develop OWL-Based Clinical Practice Guideline Execution Engines. ( 0,777891982928222 )
BMC Med Inform Decis Mak - Translating the Foundational Model of Anatomy into French using knowledge-based and lexical methods. ( 0,777053905713821 )
AMIA Annu Symp Proc - Looking for Anemia (and Other Disorders) in SNOMED CT: Comparison of Three Approaches and Practical Implications. ( 0,769110999903751 )
J Biomed Inform - An ontology-based measure to compute semantic similarity in biomedicine. ( 0,768621981439303 )
J Biomed Inform - Natural Language Processing methods and systems for biomedical ontology learning. ( 0,767889414349651 )
J Biomed Inform - Reuse of termino-ontological resources and text corpora for building a multilingual domain ontology: an application to Alzheimer's disease. ( 0,766925653932695 )
Appl Clin Inform - An empiric analysis of omaha system targets. ( 0,764785208426875 )
Methods Inf Med - Evaluation of the content coverage of SNOMED CT representing ICNP seven-axis version 1 concepts. ( 0,763354971030315 )
J Biomed Inform - Acquisition and evaluation of verb subcategorization resources for biomedicine. ( 0,762185619371994 )
J Biomed Inform - Semantic mappings and locality of nursing diagnostic concepts in UMLS. ( 0,761866798345087 )
J Biomed Inform - Hematopoietic cell types: prototype for a revised cell ontology. ( 0,755102855877064 )
J Am Med Inform Assoc - Evaluating standard terminologies for encoding allergy information. ( 0,752744769960403 )
J Biomed Inform - Terminology representation guidelines for biomedical ontologies in the semantic web notations. ( 0,75233960814211 )
J Biomed Inform - Cross-domain targeted ontology subsets for annotation: the case of SNOMED CORE and RxNorm. ( 0,751293234344287 )
J. Med. Internet Res. - Development of an obesity management ontology based on the nursing process for the mobile-device domain. ( 0,749780400817472 )
AMIA Annu Symp Proc - A family-based framework for supporting quality assurance of biomedical ontologies in BioPortal. ( 0,748354733025531 )
J Biomed Inform - A framework for unifying ontology-based semantic similarity measures: a study in the biomedical domain. ( 0,744234684459985 )
J Biomed Inform - vSPARQL: a view definition language for the semantic web. ( 0,741614678711515 )
J Biomed Inform - Deriving a probabilistic syntacto-semantic grammar for biomedicine based on domain-specific terminologies. ( 0,741369023843982 )
J Biomed Inform - Development and evaluation of an ontology for guiding appropriate antibiotic prescribing. ( 0,74064975999675 )
J Biomed Inform - A methodology for extending domain coverage in SemRep. ( 0,739755915872025 )
Comput. Biol. Med. - An ontology of cancer therapies supporting interoperability and data consistency in EPRs. ( 0,739185207402368 )
J Biomed Inform - OntoVIP: an ontology for the annotation of object models used for medical image simulation. ( 0,738005703141604 )
AMIA Annu Symp Proc - Large-scale, Exhaustive Lattice-based Structural Auditing of SNOMED CT. ( 0,737268066072588 )
AMIA Annu Symp Proc - Psychological assessment instruments: a coverage analysis using SNOMED CT, LOINC and QS terminology. ( 0,735498436814077 )
Methods Inf Med - Putting biomedical ontologies to work. ( 0,732932732312768 )
J Med Syst - SeDeLo: using semantics and description logics to support aided clinical diagnosis. ( 0,731744794965541 )
J Integr Bioinform - A semi-automated approach for anatomical ontology mapping. ( 0,728966904100067 )
J Am Med Inform Assoc - Mapping clinical phenotype data elements to standardized metadata repositories and controlled terminologies: the eMERGE Network experience. ( 0,72887280169844 )
Inform Health Soc Care - Semantics-driven modelling of user preferences for information retrieval in the biomedical domain. ( 0,728034512799782 )
AMIA Annu Symp Proc - Reasoning based quality assurance of medical ontologies: a case study. ( 0,727545564924434 )
AMIA Annu Symp Proc - Adapting a Clinical Data Repository to ICD-10-CM through the use of a Terminology Repository. ( 0,726023034266377 )
IEEE Trans Image Process - Semantic-gap-oriented active learning for multilabel image annotation. ( 0,723796855802454 )
J Biomed Inform - Enabling semantic similarity estimation across multiple ontologies: an evaluation in the biomedical domain. ( 0,723445830869197 )
Telemed J E Health - Construction of a clinical decision support system for undergoing surgery based on domain ontology and rules reasoning. ( 0,722560855977573 )
J Biomed Inform - TRAK ontology: defining standard care for the rehabilitation of knee conditions. ( 0,721888296178397 )
J Biomed Inform - Translating standards into practice - one Semantic Web API for Gene Expression. ( 0,720657752617578 )
AMIA Annu Symp Proc - Modeling patient safety incidents knowledge with the Categorial Structure method. ( 0,719860639559036 )
AMIA Annu Symp Proc - Towards the creation of a visual ontology of biomedical imaging entities. ( 0,719784750190644 )
J Biomed Inform - Cross-product extensions of the Gene Ontology. ( 0,716599468014039 )
AMIA Annu Symp Proc - Representation of nursing terminologies in UMLS. ( 0,716532664825852 )
Artif Intell Med - A four stage approach for ontology-based health information system design. ( 0,715744503973255 )
Comput Methods Programs Biomed - BiOSS: A system for biomedical ontology selection. ( 0,715664564924618 )
AMIA Annu Symp Proc - An empirically derived taxonomy of errors in SNOMED CT. ( 0,715384413751489 )
Methods Inf Med - Biomedical ontologies: toward scientific debate. ( 0,715098900679567 )
J Biomed Inform - Abstraction of complex concepts with a refined partial-area taxonomy of SNOMED. ( 0,714515615195432 )
J Biomed Inform - Formalizing MedDRA to support semantic reasoning on adverse drug reaction terms. ( 0,713327486949463 )
Comput Methods Programs Biomed - Searching biosignal databases by content and context: Research Oriented Integration System for ECG Signals (ROISES). ( 0,712589296992798 )
J Am Med Inform Assoc - Applying knowledge-anchored hypothesis discovery methods to advance clinical and translational research: the OAMiner project. ( 0,710597280077294 )
J Biomed Inform - Quality evaluation of cancer study Common Data Elements using the UMLS Semantic Network. ( 0,710324697734785 )
J Biomed Inform - Towards an ontological representation of resistance: the case of MRSA. ( 0,709890360359619 )
AMIA Annu Symp Proc - Design and evaluation of a bacterial clinical infectious diseases ontology. ( 0,709759475365446 )
J Integr Bioinform - An ontology for description of drug discovery investigations. ( 0,704996209974049 )
Brief. Bioinformatics - Semantic Web meets Integrative Biology: a survey. ( 0,704685699167945 )
J Med Syst - Time-related patient data retrieval for the case studies from the pharmacogenomics research network. ( 0,699870196778484 )
J Am Med Inform Assoc - A unified structural/terminological interoperability framework based on LexEVS: application to TRANSFoRm. ( 0,696485163966606 )
J Biomed Inform - Understanding semantic mapping evolution by observing changes in biomedical ontologies. ( 0,696421567962331 )
J Biomed Inform - A network-theoretic approach for decompositional translation across Open Biological Ontologies. ( 0,696017232801512 )
J Integr Bioinform - An evaluation of the performance of three semantic background knowledge sources in comparative anatomy. ( 0,695036931241469 )
J Chem Inf Model - Setting the record straight: the origin of the pharmacophore concept. ( 0,694831525534375 )
AMIA Annu Symp Proc - Clinical information system services and capabilities desired for scalable, standards-based, service-oriented decision support: consensus assessment of the Health Level 7 clinical decision support Work Group. ( 0,693786895700939 )
J Biomed Inform - Multiple ontologies in action: composite annotations for biosimulation models. ( 0,692678881995162 )
Methods Inf Med - Toward a view-oriented approach for aligning RDF-based biomedical repositories. ( 0,692668766298775 )
AMIA Annu Symp Proc - Integrating heterogeneous knowledge sources to acquire executable drug-related knowledge. ( 0,689518539391667 )
Artif Intell Med - A semantic graph-based approach to biomedical summarisation. ( 0,687961834361268 )
AMIA Annu Symp Proc - Applying Evolutionary Terminology Auditing to SNOMED CT. ( 0,687865283216404 )
Methods Inf Med - Spatial-symbolic Query Engine in Anatomy. ( 0,686675522086395 )
J Med Syst - Automated mapping of clinical terms into SNOMED-CT. An application to codify procedures in pathology. ( 0,686612667142648 )
AMIA Annu Symp Proc - Statistical machine translation for biomedical text: are we there yet? ( 0,685518545577546 )
J Biomed Inform - NanoParticle Ontology for cancer nanotechnology research. ( 0,684635188495145 )
AMIA Annu Symp Proc - Assessing the performance of LOINC? and RadLex for coverage of CT scans across three sites in a health information exchange. ( 0,683843393176847 )
AMIA Annu Symp Proc - Metonymies in medical terminologies. A SNOMED CT case study. ( 0,683727337177266 )
Methods Inf Med - Architectural approach to eHealth for enabling paradigm changes in health. ( 0,682618811699769 )