J Integr Bioinform - Analysis of high-throughput plant image data with the information system IAP.

Tópicos

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{ patient(2837) hospit(1953) medic(668) }
{ model(2656) set(1616) predict(1553) }
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{ age(1611) year(1155) adult(843) }
{ medic(1828) order(1363) alert(1069) }
{ signal(2180) analysi(812) frequenc(800) }
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{ use(1733) differ(960) four(931) }
{ drug(1928) target(777) effect(648) }
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{ method(2212) result(1239) propos(1039) }

Resumo

This work presents a sophisticated information system, the Integrated Analysis Platform (IAP), an approach supporting large-scale image analysis for different species and imaging systems. In its current form, IAP supports the investigation of Maize, Barley and Arabidopsis plants based on images obtained in different spectra. Several components of the IAP system, which are described in this work, cover the complete end-to-end pipeline, starting with the image transfer from the imaging infrastructure, (grid distributed) image analysis, data management for raw data and analysis results, to the automated generation of experiment reports.

Resumo Limpo

work present sophist inform system integr analysi platform iap approach support largescal imag analysi differ speci imag system current form iap support investig maiz barley arabidopsi plant base imag obtain differ spectra sever compon iap system describ work cover complet endtoend pipelin start imag transfer imag infrastructur grid distribut imag analysi data manag raw data analysi result autom generat experi report

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