Comput Biol Chem - Expression patterns of photoperiod and temperature regulated heading date genes in Oryza sativa.

Tópicos

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Resumo

In plants, flowering is a major biological phenomenon, which is regulated by an array of interactions occurring between biotic and abiotic factors. In our study, we have compared the expression profiles of flowering genes involved in the flowering pathway, which are influenced by conditions like photoperiod and temperature from seedling to heading developmental stages in two Oryza sativa indica varieties, viz., Zhenshan 97 and Minghui 63 using a expression network approach. Using the network expression approach, we found 17 co-expressed genes having the same expression profile pattern as three key photoperiod flowering genes Hd1, Ehd1 and Hd3a. We also demonstrated that these three co-expressed genes have a similar simulation pattern as temperature flowering genes. Based on our observations, we hypothesize that photoperiod and temperature regulate flowering pathways independently. The present study provides a basis for understanding the network of co-expressed genes involved in flowering pathway and presents a way to demonstrate the behavior of specific gene sets in specific cultivars.

Resumo Limpo

plant flower major biolog phenomenon regul array interact occur biotic abiot factor studi compar express profil flower gene involv flower pathway influenc condit like photoperiod temperatur seedl head development stage two oryza sativa indica varieti viz zhenshan minghui use express network approach use network express approach found coexpress gene express profil pattern three key photoperiod flower gene hd ehd hda also demonstr three coexpress gene similar simul pattern temperatur flower gene base observ hypothes photoperiod temperatur regul flower pathway independ present studi provid basi understand network coexpress gene involv flower pathway present way demonstr behavior specif gene set specif cultivar

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