Curr Protoc Bioinformatics - LipidXplorer: Software for Quantitative Shotgun Lipidomics Compatible with Multiple Mass Spectrometry Platforms.

Tópicos

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Resumo

LipidXplorer is an open-source software kit that supports the identification and quantification of molecular species of any lipid class detected by shotgun experiments performed on any mass spectrometry platform. LipidXplorer does not rely on a database of reference spectra: instead, lipid identification routines are user defined in the declarative molecular fragmentation query language (MFQL). The software supports batch processing of multiple shotgun acquisitions by high-resolution mass mapping, precursor and neutral-loss scanning, and data-dependent MS/MS lending itself to a variety of lipidomics applications in cell biology and molecular medicine. Curr. Protoc. Bioinform. 43:14.12.1-14.12.30. ? 2013 by John Wiley & Sons, Inc.

Resumo Limpo

lipidxplor opensourc softwar kit support identif quantif molecular speci lipid class detect shotgun experi perform mass spectrometri platform lipidxplor reli databas refer spectra instead lipid identif routin user defin declar molecular fragment queri languag mfql softwar support batch process multipl shotgun acquisit highresolut mass map precursor neutralloss scan datadepend msms lend varieti lipidom applic cell biolog molecular medicin curr protoc bioinform john wiley son inc

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