Int J Health Geogr - Global spatiotemporal and genetic footprint of the H5N1 avian influenza virus.

Tópicos

{ spatial(1525) area(1432) region(1030) }
{ import(1318) role(1303) understand(862) }
{ gene(2352) biolog(1181) express(1162) }
{ general(901) number(790) one(736) }
{ motion(1329) object(1292) video(1091) }
{ perform(999) metric(946) measur(919) }
{ research(1085) discuss(1038) issu(1018) }
{ activ(1138) subject(705) human(624) }
{ use(1733) differ(960) four(931) }
{ imag(2830) propos(1344) filter(1198) }
{ take(945) account(800) differ(722) }
{ studi(1119) effect(1106) posit(819) }
{ data(2317) use(1299) case(1017) }
{ age(1611) year(1155) adult(843) }
{ group(2977) signific(1463) compar(1072) }
{ intervent(3218) particip(2042) group(1664) }
{ result(1111) use(1088) new(759) }
{ can(774) often(719) complex(702) }
{ data(1737) use(1416) pattern(1282) }
{ inform(2794) health(2639) internet(1427) }
{ method(1219) similar(1157) match(930) }
{ patient(2315) diseas(1263) diabet(1191) }
{ error(1145) method(1030) estim(1020) }
{ chang(1828) time(1643) increas(1301) }
{ extract(1171) text(1153) clinic(932) }
{ risk(3053) factor(974) diseas(938) }
{ health(3367) inform(1360) care(1135) }
{ state(1844) use(1261) util(961) }
{ model(2656) set(1616) predict(1553) }
{ data(3008) multipl(1320) sourc(1022) }
{ time(1939) patient(1703) rate(768) }
{ patient(1821) servic(1111) care(1106) }
{ can(981) present(881) function(850) }
{ analysi(2126) use(1163) compon(1037) }
{ decis(3086) make(1611) patient(1517) }
{ activ(1452) weight(1219) physic(1104) }
{ model(3404) distribut(989) bayesian(671) }
{ imag(1947) propos(1133) code(1026) }
{ system(1976) rule(880) can(841) }
{ measur(2081) correl(1212) valu(896) }
{ imag(1057) registr(996) error(939) }
{ bind(1733) structur(1185) ligand(1036) }
{ sequenc(1873) structur(1644) protein(1328) }
{ featur(3375) classif(2383) classifi(1994) }
{ network(2748) neural(1063) input(814) }
{ imag(2675) segment(2577) method(1081) }
{ studi(2440) review(1878) systemat(933) }
{ assess(1506) score(1403) qualiti(1306) }
{ treatment(1704) effect(941) patient(846) }
{ surgeri(1148) surgic(1085) robot(1054) }
{ framework(1458) process(801) describ(734) }
{ problem(2511) optim(1539) algorithm(950) }
{ learn(2355) train(1041) set(1003) }
{ concept(1167) ontolog(924) domain(897) }
{ clinic(1479) use(1117) guidelin(835) }
{ algorithm(1844) comput(1787) effici(935) }
{ method(1557) propos(1049) approach(1037) }
{ data(1714) softwar(1251) tool(1186) }
{ design(1359) user(1324) use(1319) }
{ control(1307) perform(991) simul(935) }
{ model(2220) cell(1177) simul(1124) }
{ care(1570) inform(1187) nurs(1089) }
{ method(984) reconstruct(947) comput(926) }
{ search(2224) databas(1162) retriev(909) }
{ featur(1941) imag(1645) propos(1176) }
{ case(1353) use(1143) diagnosi(1136) }
{ howev(809) still(633) remain(590) }
{ data(3963) clinic(1234) research(1004) }
{ studi(1410) differ(1259) use(1210) }
{ system(1050) medic(1026) inform(1018) }
{ model(2341) predict(2261) use(1141) }
{ visual(1396) interact(850) tool(830) }
{ compound(1573) activ(1297) structur(1058) }
{ perform(1367) use(1326) method(1137) }
{ blood(1257) pressur(1144) flow(957) }
{ record(1888) medic(1808) patient(1693) }
{ model(3480) simul(1196) paramet(876) }
{ monitor(1329) mobil(1314) devic(1160) }
{ ehr(2073) health(1662) electron(1139) }
{ research(1218) medic(880) student(794) }
{ patient(2837) hospit(1953) medic(668) }
{ medic(1828) order(1363) alert(1069) }
{ signal(2180) analysi(812) frequenc(800) }
{ cost(1906) reduc(1198) effect(832) }
{ sampl(1606) size(1419) use(1276) }
{ first(2504) two(1366) second(1323) }
{ use(2086) technolog(871) perceiv(783) }
{ health(1844) social(1437) communiti(874) }
{ structur(1116) can(940) graph(676) }
{ high(1669) rate(1365) level(1280) }
{ cancer(2502) breast(956) screen(824) }
{ use(976) code(926) identifi(902) }
{ drug(1928) target(777) effect(648) }
{ implement(1333) system(1263) develop(1122) }
{ survey(1388) particip(1329) question(1065) }
{ estim(2440) model(1874) function(577) }
{ process(1125) use(805) approach(778) }
{ method(1969) cluster(1462) data(1082) }
{ method(2212) result(1239) propos(1039) }
{ detect(2391) sensit(1101) algorithm(908) }

Resumo

CKGROUND: Since 2005, the Qinghai-like lineage of the highly pathogenic avian influenza A virus H5N1 has rapidly spread westward to Europe, the Middle East and Africa, reaching a dominant level at a global scale in 2006.METHODS: Based on a combination of genetic sequence data and H5N1 outbreak information from 2005 to 2011, we use an interdisciplinary approach to improve our understanding of the transmission pattern of this particular clade 2.2, and present cartography of global spatiotemporal transmission footprints with genetic characteristics.RESULTS: Four major viral transmission routes were derived with three sources- Russia, Mongolia, and the Middle East (Kuwait and Saudi Arabia)-in the three consecutive years 2005, 2006 and 2007. With spatiotemporal transmission along each route, genetic distances to isolate A/goose/Guangdong/1996 are becoming significantly larger, leading to a more challenging situation in certain regions like Korea, India, France, Germany, Nigeria and Sudan. Europe and India have had at least two incursions along multiple routes, causing a mixed virus situation. In addition, spatiotemporal distribution along the routes showed that 2007/2008 was a temporal separation point for the infection of different host species; specifically, wild birds were the main host in 2005-2007/2008 and poultry was responsible for the genetic mutation in 2009-2011. "Global-to-local" and "high-to-low latitude" transmission footprints have been observed.CONCLUSIONS: Our results suggest that both wild birds and poultry play important roles in the transmission of the H5N1 virus clade, but with different spatial, temporal, and genetic dominance. These characteristics necessitate that special attention be paid to countries along the transmission routes.

Resumo Limpo

ckground sinc qinghailik lineag high pathogen avian influenza virus hn rapid spread westward europ middl east africa reach domin level global scale method base combin genet sequenc data hn outbreak inform use interdisciplinari approach improv understand transmiss pattern particular clade present cartographi global spatiotempor transmiss footprint genet characteristicsresult four major viral transmiss rout deriv three sourc russia mongolia middl east kuwait saudi arabiain three consecut year spatiotempor transmiss along rout genet distanc isol agooseguangdong becom signific larger lead challeng situat certain region like korea india franc germani nigeria sudan europ india least two incurs along multipl rout caus mix virus situat addit spatiotempor distribut along rout show tempor separ point infect differ host speci specif wild bird main host poultri respons genet mutat globaltoloc hightolow latitud transmiss footprint observedconclus result suggest wild bird poultri play import role transmiss hn virus clade differ spatial tempor genet domin characterist necessit special attent paid countri along transmiss rout

Resumos Similares

Int J Health Geogr - Nonparametric intensity bounds for the delineation of spatial clusters. ( 0,762291110417524 )
Int J Health Geogr - Pathogenic landscapes: interactions between land, people, disease vectors, and their animal hosts. ( 0,754717197896244 )
Int J Health Geogr - Density estimation and adaptive bandwidths: a primer for public health practitioners. ( 0,750299087058309 )
Int J Health Geogr - Identifying landscape features associated with Rift Valley fever virus transmission, Ferlo region, Senegal, using very high spatial resolution satellite imagery. ( 0,743162132159915 )
J Integr Bioinform - Inter-dinucleotide distances in the human genome: an analysis of the whole-genome and protein-coding distributions. ( 0,735499551497794 )
Int J Health Geogr - Mapping HIV clustering: a strategy for identifying populations at high risk of HIV infection in sub-Saharan Africa. ( 0,7315930624961 )
Int J Health Geogr - A modified version of Moran's I. ( 0,728708124878776 )
Int J Health Geogr - Demarcation of local neighborhoods to study relations between contextual factors and health. ( 0,72733690603853 )
Int J Health Geogr - A high resolution spatial population database of Somalia for disease risk mapping. ( 0,725573941897533 )
Int J Health Geogr - Geospatial association of endemicity of ataxic polyneuropathy and highly cyanogenic cassava cultivars. ( 0,725297603419074 )
Int J Health Geogr - Ecological niche modelling of Hemipteran insects in Cameroon; the paradox of a vector-borne transmission for Mycobacterium ulcerans, the causative agent of Buruli ulcer. ( 0,72285546856635 )
Int J Health Geogr - The effect of spatial aggregation on performance when mapping a risk of disease. ( 0,720773014931613 )
Int J Health Geogr - Spatial epidemiology of eastern equine encephalitis in Florida. ( 0,717574478877496 )
Int J Health Geogr - Highways and outposts: economic development and health threats in the central Brazilian Amazon region. ( 0,71624557961717 )
Int J Health Geogr - Alcohol outlets and clusters of violence. ( 0,715854217311594 )
Comput Biol Chem - DNA clustering and genome complexity. ( 0,711837886059911 )
Int J Health Geogr - Hand, foot and mouth disease: spatiotemporal transmission and climate. ( 0,711005644376692 )
Int J Health Geogr - A country bug in the city: urban infestation by the Chagas disease vector Triatoma infestans in Arequipa, Peru. ( 0,706747695142635 )
Spat Spatiotemporal Epidemiol - The rubber plantation environment and Lassa fever epidemics in Liberia, 2008-2012: a spatial regression. ( 0,702793431735857 )
Int J Health Geogr - Spatial distribution and cluster analysis of sexual risk behaviors reported by young men in Kisumu, Kenya. ( 0,696984548768575 )
Int J Health Geogr - Retrospective space-time analysis of H5N1 Avian Influenza emergence in Thailand. ( 0,693889069028989 )
Int J Health Geogr - Modelling the variation of land surface temperature as determinant of risk of heat-related health events. ( 0,683326192038322 )
Int J Health Geogr - Does context matter for the relationship between deprivation and all-cause mortality? The West vs. the rest of Scotland. ( 0,6813430737639 )
Int J Health Geogr - Spatial pattern of body mass index among adults in the diabetes study of Northern California (DISTANCE). ( 0,680868410299669 )
Int J Health Geogr - Including the urban heat island in spatial heat health risk assessment strategies: a case study for Birmingham, UK. ( 0,679125517321235 )
Spat Spatiotemporal Epidemiol - Statistical methods for bivariate spatial analysis in marked points. Examples in spatial epidemiology. ( 0,675300144642177 )
Spat Spatiotemporal Epidemiol - Adjusted significance cutoffs for hypothesis tests applied with generalized additive models with bivariate smoothers. ( 0,673162183024003 )
Spat Spatiotemporal Epidemiol - Prostate cancer incidence in light of the spatial distribution of another screening-detectable cancer. ( 0,668153904963941 )
Int J Health Geogr - Identification and location of hot and cold spots of treated prevalence of depression in Catalonia (Spain). ( 0,668054928056064 )
Int J Health Geogr - An open source software for fast grid-based data-mining in spatial epidemiology (FGBASE). ( 0,665807186743723 )
Int J Health Geogr - An application of the edge effect in measuring accessibility to multiple food retailer types in southwestern Ontario, Canada. ( 0,664889304880406 )
Int J Health Geogr - Developing the atlas of cancer in Queensland: methodological issues. ( 0,664554635305215 )
Int J Health Geogr - Potential corridors and barriers for plague spread in Central Asia. ( 0,664205475483712 )
Neural Comput - Optimal population codes for space: grid cells outperform place cells. ( 0,661440774713121 )
Int J Health Geogr - Schistosomiasis transmission and environmental change: a spatio-temporal analysis in Porto de Galinhas, Pernambuco--Brazil. ( 0,66137739495325 )
Spat Spatiotemporal Epidemiol - Quantifying the magnitude of environmental exposure misclassification when using imprecise address proxies in public health research. ( 0,660692794399929 )
Int J Health Geogr - How do changes to the built environment influence walking behaviors? A longitudinal study within a university campus in Hong Kong. ( 0,660656920541061 )
Spat Spatiotemporal Epidemiol - The built environment and depressive symptoms among urban youth: A spatial regression study. ( 0,659686143676645 )
Int J Health Geogr - Modeling spatial accessibility to parks: a national study. ( 0,659028787662482 )
Spat Spatiotemporal Epidemiol - How to choose geographical units in ecological studies: proposal and application to campylobacteriosis. ( 0,654880780621262 )
J Med Syst - A small-area study of environmental risk assessment of outdoor falls. ( 0,654553600910092 )
Int J Health Geogr - The modifiable areal unit problem (MAUP) in the relationship between exposure to NO2 and respiratory health. ( 0,652886232434771 )
Int J Health Geogr - Urban sprawl, obesity, and cancer mortality in the United States: cross-sectional analysis and methodological challenges. ( 0,6520643386266 )
Int J Health Geogr - Enhancing spatial detection accuracy for syndromic surveillance with street level incidence data. ( 0,651356568576187 )
Int J Health Geogr - A probabilistic sampling method (PSM) for estimating geographic distance to health services when only the region of residence is known. ( 0,650387504818365 )
Int J Health Geogr - Is temperature the main cause of dengue rise in non-endemic countries? The case of Argentina. ( 0,649279712018168 )
Spat Spatiotemporal Epidemiol - Violent crime in San Antonio, Texas: an application of spatial epidemiological methods. ( 0,647760518504842 )
Spat Spatiotemporal Epidemiol - Spatial and statistical methodologies to determine the distribution of dengue in Brazilian municipalities and relate incidence with the Health Vulnerability Index. ( 0,647650957800871 )
Int J Health Geogr - Geographical variation of Crohn's disease residual incidence in the Province of Quebec, Canada. ( 0,647116785611073 )
Int J Health Geogr - Smart density: A more accurate method of measuring rural residential density for health-related research. ( 0,646414922244975 )
Int J Health Geogr - Agricultural landscape and spatial distribution of Toxoplasma gondii in rural environment: an agent-based model. ( 0,646357559895694 )
Int J Health Geogr - Relevance of the type III error in epidemiological maps. ( 0,645973828336137 )
J. Comput. Biol. - Integration of 198 ChIP-seq datasets reveals human cis-regulatory regions. ( 0,644025668466204 )
Brief. Bioinformatics - Towards a comprehensive picture of the genetic landscape of complex traits. ( 0,643305266648515 )
Int J Health Geogr - Modeling the spatial distribution of Chagas disease vectors using environmental variables and people?s knowledge. ( 0,63869167603707 )
Int J Health Geogr - Terra and Aqua satellites track tiger mosquito invasion: modelling the potential distribution of Aedes albopictus in north-eastern Italy. ( 0,637014600893284 )
Comput Math Methods Med - Quantitative measurements in 3-dimensional datasets of mouse lymph nodes resolve organ-wide functional dependencies. ( 0,635479806408057 )
Spat Spatiotemporal Epidemiol - A spatial measure of neighborhood level racial isolation applied to low birthweight, preterm birth, and birthweight in North Carolina. ( 0,634492940543917 )
Int J Health Geogr - A ubiquitous method for street scale spatial data collection and analysis in challenging urban environments: mapping health risks using spatial video in Haiti. ( 0,633685275927218 )
Int J Health Geogr - Using Landsat satellite data to support pesticide exposure assessment in California. ( 0,633637008749488 )
Int J Health Geogr - A spatial approach for the epidemiology of antibiotic use and resistance in community-based studies: the emergence of urban clusters of Escherichia coli quinolone resistance in Sao Paulo, Brasil. ( 0,632396982633689 )
Int J Health Geogr - Identification of racial disparities in breast cancer mortality: does scale matter? ( 0,630597725083991 )
Int J Health Geogr - Particulate air pollution and health inequalities: a Europe-wide ecological analysis. ( 0,626966652113548 )
Spat Spatiotemporal Epidemiol - Generalizing the spatial relative risk function. ( 0,626558823409842 )
Int J Health Geogr - A geographic analysis of population density thresholds in the influenza pandemic of 1918-19. ( 0,624869371626306 )
Int J Health Geogr - Analysis of simultaneous space-time clusters of Campylobacter spp. in humans and in broiler flocks using a multiple dataset approach. ( 0,623526376010866 )
Int J Health Geogr - Spatial patterns of fetal loss and infant death in an arsenic-affected area in Bangladesh. ( 0,620497686460616 )
Comput Biol Chem - Orphan and gene related CpG Islands follow power-law-like distributions in several genomes: evidence of function-related and taxonomy-related modes of distribution. ( 0,620271165594577 )
Wiley Interdiscip Rev Syst Biol Med - Molecular mechanisms underlying neuronal synaptic plasticity: systems biology meets computational neuroscience in the wilds of synaptic plasticity. ( 0,618860341366631 )
Geospat Health - Redefining climate regions in the United States of America using satellite remote sensing and machine learning for public health applications. ( 0,618858095850345 )
Int J Health Geogr - The effects of local street network characteristics on the positional accuracy of automated geocoding for geographic health studies. ( 0,617891650803051 )
Int J Health Geogr - Data-driven inference for the spatial scan statistic. ( 0,617032354712345 )
Spat Spatiotemporal Epidemiol - Spatial patterns of human papillomavirus-associated cancers within the state of Minnesota, 1998-2007. ( 0,614905210722988 )
Int J Health Geogr - Outdoor air pollution, subtypes and severity of ischemic stroke--a small-area level ecological study. ( 0,614051522080884 )
Spat Spatiotemporal Epidemiol - Spatio-temporal epidemiology: principles and opportunities. ( 0,612611534723203 )
Int J Health Geogr - Diarrheal disease risk in rural Bangladesh decreases as tubewell density increases: a zero-inflated and geographically weighted analysis. ( 0,611516571244896 )
Int J Health Geogr - Associations between street connectivity and active transportation. ( 0,611293702279401 )
Int J Health Geogr - Associations of supermarket accessibility with obesity and fruit and vegetable consumption in the conterminous United States. ( 0,610838514885703 )
Spat Spatiotemporal Epidemiol - Statistical power of disease cluster and clustering tests for rare diseases: a simulation study of point sources. ( 0,60999169078565 )
Int J Health Geogr - Racial differences in the built environment--body mass index relationship? A geospatial analysis of adolescents in urban neighborhoods. ( 0,608208801413079 )
Int J Health Geogr - International variation in neighborhood walkability, transit, and recreation environments using geographic information systems: the IPEN adult study. ( 0,607873125533129 )
Int J Health Geogr - The spatial distribution of esophageal and gastric cancer in Caspian region of Iran: an ecological analysis of diet and socio-economic influences. ( 0,607452625206984 )
Sci Data - A comprehensive database of the geographic spread of past human Ebola outbreaks. ( 0,607104417396894 )
Spat Spatiotemporal Epidemiol - Risk factor modelling of the spatio-temporal patterns of highly pathogenic avian influenza (HPAIV) H5N1: a review. ( 0,60645445552976 )
Int J Health Geogr - Can a deprivation index be used legitimately over both urban and rural areas? ( 0,602987761145486 )
Spat Spatiotemporal Epidemiol - Using geographical information systems and cartograms as a health service quality improvement tool. ( 0,602926883174047 )
Int J Health Geogr - Spatial-explicit modeling of social vulnerability to malaria in East Africa. ( 0,602884756514621 )
J. Med. Internet Res. - Using a geolocation social networking application to calculate the population density of sex-seeking gay men for research and prevention services. ( 0,600736442202051 )
Int J Health Geogr - A power comparison of generalized additive models and the spatial scan statistic in a case-control setting. ( 0,597142326867696 )
Int J Health Geogr - Statistical air quality predictions for public health surveillance: evaluation and generation of county level metrics of PM2.5 for the environmental public health tracking network. ( 0,593499487933141 )
Int J Health Geogr - Analysis of matched geographical areas to study potential links between environmental exposure to oil refineries and non-Hodgkin lymphoma mortality in Spain. ( 0,592472096225705 )
Int J Health Geogr - MosquitoMap and the Mal-area calculator: new web tools to relate mosquito species distribution with vector borne disease. ( 0,591847736331903 )
Int J Health Geogr - Land-use and land-cover assessment for the study of lifestyle change in a rural Mexican community: the Maycoba project. ( 0,591492033296254 )
Int J Health Geogr - Self-organizing maps as an approach to exploring spatiotemporal diffusion patterns. ( 0,59096939868127 )
Int J Health Geogr - Estimating the reproductive number in the presence of spatial heterogeneity of transmission patterns. ( 0,589261287506483 )
Int J Health Geogr - Using GPS technology to (re)-examine operational definitions of 'neighbourhood' in place-based health research. ( 0,58899235296249 )
Int J Health Geogr - Effects of georeferencing effort on mapping monkeypox case distributions and transmission risk. ( 0,588795116001629 )
Int J Health Geogr - Feasibility and utility of mapping disease risk at the neighbourhood level within a Canadian public health unit: an ecological study. ( 0,588790760897293 )
Spat Spatiotemporal Epidemiol - Measuring the spatial accuracy of the spatial scan statistic. ( 0,588524050123169 )
Int J Health Geogr - Creating 'obesogenic realities'; do our methodological choices make a difference when measuring the food environment? ( 0,587616053927758 )